Table 1 (sample characteristics).

number of total cases In each strata, total number should be equal to = 51964

## [1] 51964

Sex

## 
##     F     M 
## 19996 31968
## 
##    F    M 
## 38.5 61.5

Missing Value in Sex

## [1] 0

Age

## 
##   0-4  5-11 12-17   17+ 
##  1146  1505  2025 47288
## 
##   0-4  5-11 12-17   17+ 
##   2.2   2.9   3.9  91.0

Missing Value in Age

## [1] 0

Clinical outcome

## 
##     ALIVE      DEAD RECOVERED   UNKNOWN 
##     49283      1110       909         8

Missing Value in Clinical outcome I have counted ‘8’ values with UNKNOWN status in NAs.

## [1] 662
## [1] 1.3

ALIVE, DEAD, RECOVERED (%)

## 
##     ALIVE      DEAD RECOVERED   UNKNOWN 
##      94.8       2.1       1.7       0.0

Country wise

## 
##          Botswana      Burkina_faso              Chad             Congo 
##              1896              1007               909              9381 
##          Eswatini            Guinea           Liberia         Mauritius 
##              4595             10198              1293               209 
##        Mozambique           Namibia             Niger            Rwanda 
##              3995              7485              1081              4035 
## Sao_tome_principe      Sierra_leone            Uganda 
##               882              2028              2970
## 
##          Botswana      Burkina_faso              Chad             Congo 
##               3.6               1.9               1.7              18.1 
##          Eswatini            Guinea           Liberia         Mauritius 
##               8.8              19.6               2.5               0.4 
##        Mozambique           Namibia             Niger            Rwanda 
##               7.7              14.4               2.1               7.8 
## Sao_tome_principe      Sierra_leone            Uganda 
##               1.7               3.9               5.7

Table 2.

country age groups confirmed_cases_each_group confirmed_deaths_each_group
Botswana 0-4 26 0
Botswana 5-11 56 0
Botswana 12-17 79 0
Botswana 17+ 1735 0
Burkina_faso 0-4 23 0
Burkina_faso 5-11 14 0
Burkina_faso 12-17 29 0
Burkina_faso 17+ 941 39
Chad 0-4 5 0
Chad 5-11 1 0
Chad 12-17 13 0
Chad 17+ 890 93
Congo 0-4 78 4
Congo 5-11 163 2
Congo 12-17 246 7
Congo 17+ 8894 376
Eswatini 0-4 119 0
Eswatini 5-11 206 0
Eswatini 12-17 208 1
Eswatini 17+ 4062 88
Guinea 0-4 352 0
Guinea 5-11 311 1
Guinea 12-17 445 0
Guinea 17+ 9090 66
Liberia 0-4 26 0
Liberia 5-11 47 0
Liberia 12-17 91 1
Liberia 17+ 1129 75
Mauritius 0-4 3 0
Mauritius 5-11 4 0
Mauritius 12-17 8 0
Mauritius 17+ 194 2
Mozambique 0-4 193 2
Mozambique 5-11 189 1
Mozambique 12-17 196 2
Mozambique 17+ 3417 22
Namibia 0-4 149 0
Namibia 5-11 218 0
Namibia 12-17 259 0
Namibia 17+ 6859 23
Niger 0-4 4 1
Niger 5-11 26 0
Niger 12-17 43 0
Niger 17+ 1008 74
Rwanda 0-4 61 0
Rwanda 5-11 107 0
Rwanda 12-17 170 0
Rwanda 17+ 3697 20
Sao_tome_principe 0-4 18 0
Sao_tome_principe 5-11 38 0
Sao_tome_principe 12-17 42 2
Sao_tome_principe 17+ 784 13
Sierra_leone 0-4 72 2
Sierra_leone 5-11 93 0
Sierra_leone 12-17 123 1
Sierra_leone 17+ 1740 156
Uganda 0-4 17 0
Uganda 5-11 32 0
Uganda 12-17 73 0
Uganda 17+ 2848 36

Children vs adults (combining data from all the 15 countries)

Figure 3.

## [1] "Botswana"
## [1] "Botswana"
## [1] "1"
## [1] "Botswana"
## [1] "Burkina_Faso"
## [1] "Burkina_Faso"
## [1] "1"
## [1] "Burkina_Faso"
## [1] "Chad"
## [1] "Chad"
## [1] "2"
## [1] "Chad"
## [1] "Congo"
## [1] "Congo"
## [1] "1"
## [1] "Congo"
## [1] "Eswatini"
## [1] "Eswatini"
## [1] "1"
## [1] "Eswatini"
## [1] "Guinea"
## [1] "Guinea"
## [1] "2"
## [1] "Guinea"
## [1] "Liberia"
## [1] "Liberia"
## [1] "1"
## [1] "Liberia"
## [1] "Mauritius"
## [1] "Mauritius"
## [1] "2"
## [1] "Mauritius"
## [1] "Mozambique"
## [1] "Mozambique"
## [1] "2"
## [1] "Mozambique"
## [1] "Namibia"
## [1] "Namibia"
## [1] "1"
## [1] "Namibia"
## [1] "Niger"
## [1] "Niger"
## [1] "1"
## [1] "Niger"
## [1] "Rwanda"
## [1] "Rwanda"
## [1] "2"
## [1] "Rwanda"
## [1] "Sao_tome_principe"
## [1] "Sao_tome_principe"
## [1] "1"
## [1] "Sao_tome_principe"
## [1] "Sierra_leone"
## [1] "Sierra_leone"
## [1] "2"
## [1] "Sierra_leone"
## [1] "Uganda"
## [1] "Uganda"
## [1] "1"
## [1] "Uganda"